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    SUPERSEDED Local Coverage Article:
    Billing and Coding: MolDX: Testing of Multiple Genes (A57503)

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    Expand/Collapse the browser section Contractor Information

    Contractor NameContract TypeContract NumberJurisdictionState(s)
    Palmetto GBA A and B MAC10111 - MAC AJ - JAlabama
    Palmetto GBA A and B MAC10112 - MAC BJ - JAlabama
    Palmetto GBA A and B MAC10211 - MAC AJ - JGeorgia
    Palmetto GBA A and B MAC10212 - MAC BJ - JGeorgia
    Palmetto GBA A and B MAC10311 - MAC AJ - JTennessee
    Palmetto GBA A and B MAC10312 - MAC BJ - JTennessee
    Palmetto GBA A and B and HHH MAC11201 - MAC AJ - MSouth Carolina
    Palmetto GBA A and B and HHH MAC11202 - MAC BJ - MSouth Carolina
    Palmetto GBA A and B and HHH MAC11301 - MAC AJ - MVirginia
    Palmetto GBA A and B and HHH MAC11302 - MAC BJ - MVirginia
    Palmetto GBA A and B and HHH MAC11401 - MAC AJ - MWest Virginia
    Palmetto GBA A and B and HHH MAC11402 - MAC BJ - MWest Virginia
    Palmetto GBA A and B and HHH MAC11501 - MAC AJ - MNorth Carolina
    Palmetto GBA A and B and HHH MAC11502 - MAC BJ - MNorth Carolina

    Expand/Collapse the Article Information section Article Information

    General Information

    General Article Information Table
    Superseded stamp
    Article ID
    A57503

    Article Title
    Billing and Coding: MolDX: Testing of Multiple Genes

    Article Type
    Billing and Coding

    AMA CPT / ADA CDT / AHA NUBC Copyright Statement
    CPT codes, descriptions and other data only are copyright 2020 American Medical Association. All Rights Reserved. Applicable FARS/HHSARS apply.

    Fee schedules, relative value units, conversion factors and/or related components are not assigned by the AMA, are not part of CPT, and the AMA is not recommending their use. The AMA does not directly or indirectly practice medicine or dispense medical services. The AMA assumes no liability for data contained or not contained herein.

    Current Dental Terminology © 2020 American Dental Association. All rights reserved.

    Copyright © 2013 - 2020, the American Hospital Association, Chicago, Illinois. Reproduced by CMS with permission. No portion of the American Hospital Association (AHA) copyrighted materials contained within this publication may be copied without the express written consent of the AHA. AHA copyrighted materials including the UB-04 codes and descriptions may not be removed, copied, or utilized within any software, product, service, solution or derivative work without the written consent of the AHA. If an entity wishes to utilize any AHA materials, please contact the AHA at 312-893-6816. Making copies or utilizing the content of the UB-04 Manual, including the codes and/or descriptions, for internal purposes, resale and/or to be used in any product or publication; creating any modified or derivative work of the UB-04 Manual and/or codes and descriptions; and/or making any commercial use of UB-04 Manual or any portion thereof, including the codes and/or descriptions, is only authorized with an express license from the American Hospital Association. To license the electronic data file of UB-04 Data Specifications, contact Tim Carlson at (312) 893-6816. You may also contact us at ub04@aha.org.


    Original Effective Date
    10/21/2019

    Revision Effective Date
    N/A

    Revision Ending Date
    N/A

    Retirement Date
    N/A

    CMS National Coverage Policy

    Title XVIII of the Social Security Act, §1862(a)(1)(A) allows coverage and payment for only those services that are considered to be reasonable and necessary for the diagnosis or treatment of illness or injury or to improve the functioning of a malformed body member.

    Title XVIII of the Social Security Act, §1833(e) prohibits Medicare payment for any claim which lacks the necessary information to process the claim.

    Title 42 CFR §410.32 Diagnostic x-ray tests, diagnostic laboratory tests, and other diagnostic tests: Conditions

    Article Guidance

    Article Text:

    The following information will be effective 10/21/2019 for dates of service on or after 10/15/2019.

    A panel of genes is a distinct procedural service from a series of individual genes. All services billed to Medicare must be reasonable and necessary. As such, if a provider or supplier submits a claim for a panel, then the patient’s medical record must reflect that the panel was reasonable and necessary. Alternatively, if a provider or supplier bills for a number of individual genes, then the patient’s medical record must reflect that each individual gene is reasonable and necessary.

    For ease of reading the term “gene” when used in this document will be used to indicate a gene, region of a gene, and / or variant(s) of a gene.

    Genes can be assayed serially or in parallel. Genes assayed on the same date of service are considered to be assayed in parallel if the result of one assay does not affect the decision to complete the assay on another gene, and the two genes are being tested for the same indication. Genes assayed on the same date of service are considered to be assayed serially when there is a reflexive decision component where the results of the analysis of one or more genes determines whether the results of additional analyses are reasonable and necessary.

    If a laboratory assays two or more genes in a patient in parallel, then those two or more genes will be considered part of the same panel. A panel constitutes a single procedural service, so one HCPCS codes must be submitted for the panel. If the laboratory assays genes in serial, then the laboratory must submit claims for genes individually. The order by the treating clinician must reflect whether the treating clinician is ordering a panel or single genes, and additionally, the patient’s medical record must reflect that the service billed was reasonable and necessary.

    Two examples:

    Single Service Example: A clinician orders 5 specific genes associated with breast cancer. The laboratory analyzes the 5 genes for common mutations using polymerase chain reaction. All 5 PCR procedures are started prior to the results of any one PCR procedure being known. The results are signed off on simultaneously, and all 5 results are sent to a clinician.

    This would be considered a single procedural service, a single 5 gene panel, and it must be billed as such. This single panel must be reasonable and necessary to be billed to Medicare.

    Multiple Distinct Procedural Services Example: A clinician requests that genes associated with early onset colorectal cancer be analyzed in a patient. The clinician orders stepwise reflex testing where a negative or positive result in one gene determines whether additional analysis on other genes will be performed or what that will be.

    Each gene assayed represents one procedural service, so if more than one gene is analyzed, then multiple procedural services may be billed in some patients for whom reflex testing goes beyond the first gene. Each gene billed to Medicare must be individually reasonable and necessary. A clinician’s order is not by itself sufficient to indicate that a test was reasonable and necessary. The record must reflect that the test is used in the management of the beneficiary's specific medical problem in accordance with CFR §410.32.

    Labs must register a test with the Diagnostics Exchange as it reflected on the order form and is run in the laboratory. If a gene / variant is tested as part of a panel, then the lab must register the panel and must submit the correct z-code and CPT code for the panel. If a lab has a panel but sometimes also analyzes individual genes from the panel, the lab must register both the panel and the individual genes that are analyzed.

    In general two or more codes describing a genetic test billed on the same beneficiary on the same date may constitute a panel, and if so the service must be billed as a single procedural service. We would generally expect that a provider or supplier would not bill for more than two distinct laboratory genetic testing procedural services on a single beneficiary on a single date of service. If providers or suppliers do bill for more than two distinct laboratory genetic testing procedural services on a single beneficiary on a single date of service, the provider or supplier must attest that each additional service billed is a distinct procedural service using the 59 modifier.

    The use of the 59 modifier will be considered an attestation that distinct procedural services are being performed rather than a panel. Providers and suppliers must use the 59 modifier in conjunction with other modifiers where appropriate. When providers and suppliers bill for multiple distinct procedural services, each service must be reasonable and necessary.

    Laboratories that are billing for many individual genes using the 59 modifier rather than panels may be subject to medical review as outliers.

    Expand/Collapse the Coding Information section Coding Information

    Superseded stamp
    CPT/HCPCS Codes

    Group 1 Paragraph:

    When more than two codes from this list are submitted for the same beneficiary on the same date of service, the claims processing system will reject every code submitted after the first two services. However, if a lab runs more than two distinct procedural services from this list on a single date of service, then the lab must use the 59 modifier with each additional service billed as an attestation that it is a distinct procedural service.



    Group 1 Codes:
    CPT/HCPCS Codes Information Table
    CODEDESCRIPTION
    81120 Idh1 common variants
    81121 Idh2 common variants
    81161 Dmd dup/delet analysis
    81162 Brca1&2 gen full seq dup/del
    81163 Brca1&2 gene full seq alys
    81164 Brca1&2 gen ful dup/del alys
    81165 Brca1 gene full seq alys
    81166 Brca1 gene full dup/del alys
    81167 Brca2 gene full dup/del alys
    81170 Abl1 gene
    81171 Aff2 gene detc abnor alleles
    81172 Aff2 gene charac alleles
    81173 Ar gene full gene sequence
    81174 Ar gene known famil variant
    81175 Asxl1 full gene sequence
    81176 Asxl1 gene target seq alys
    81177 Atn1 gene detc abnor alleles
    81178 Atxn1 gene detc abnor allele
    81179 Atxn2 gene detc abnor allele
    81180 Atxn3 gene detc abnor allele
    81181 Atxn7 gene detc abnor allele
    81182 Atxn8os gen detc abnor allel
    81183 Atxn10 gene detc abnor allel
    81184 Cacna1a gen detc abnor allel
    81185 Cacna1a gene full gene seq
    81186 Cacna1a gen known famil vrnt
    81187 Cnbp gene detc abnor allele
    81188 Cstb gene detc abnor allele
    81189 Cstb gene full gene sequence
    81190 Cstb gene known famil vrnt
    81200 Aspa gene
    81201 Apc gene full sequence
    81202 Apc gene known fam variants
    81203 Apc gene dup/delet variants
    81204 Ar gene charac alleles
    81205 Bckdhb gene
    81206 Bcr/abl1 gene major bp
    81207 Bcr/abl1 gene minor bp
    81208 Bcr/abl1 gene other bp
    81209 Blm gene
    81210 Braf gene
    81212 Brca1&2 185&5385&6174 vrnt
    81215 Brca1 gene known famil vrnt
    81216 Brca2 gene full seq alys
    81217 Brca2 gene known famil vrnt
    81218 Cebpa gene full sequence
    81219 Calr gene com variants
    81220 Cftr gene com variants
    81221 Cftr gene known fam variants
    81222 Cftr gene dup/delet variants
    81223 Cftr gene full sequence
    81224 Cftr gene intron poly t
    81225 Cyp2c19 gene com variants
    81226 Cyp2d6 gene com variants
    81227 Cyp2c9 gene com variants
    81228 Cytogen micrarray copy nmbr
    81229 Cytogen m array copy no&snp
    81230 Cyp3a4 gene common variants
    81231 Cyp3a5 gene common variants
    81232 Dpyd gene common variants
    81233 Btk gene common variants
    81234 Dmpk gene detc abnor allele
    81235 Egfr gene com variants
    81236 Ezh2 gene full gene sequence
    81237 Ezh2 gene common variants
    81238 F9 full gene sequence
    81239 Dmpk gene charac alleles
    81240 F2 gene
    81241 F5 gene
    81242 Fancc gene
    81243 Fmr1 gene detection
    81244 Fmr1 gene charac alleles
    81245 Flt3 gene
    81246 Flt3 gene analysis
    81247 G6pd gene alys cmn variant
    81248 G6pd known familial variant
    81249 G6pd full gene sequence
    81250 G6pc gene
    81251 Gba gene
    81252 Gjb2 gene full sequence
    81253 Gjb2 gene known fam variants
    81254 Gjb6 gene com variants
    81255 Hexa gene
    81256 Hfe gene
    81257 Hba1/hba2 gene
    81258 Hba1/hba2 gene fam vrnt
    81259 Hba1/hba2 full gene sequence
    81260 Ikbkap gene
    81261 Igh gene rearrange amp meth
    81262 Igh gene rearrang dir probe
    81263 Igh vari regional mutation
    81264 Igk rearrangeabn clonal pop
    81265 Str markers specimen anal
    81266 Str markers spec anal addl
    81267 Chimerism anal no cell selec
    81268 Chimerism anal w/cell select
    81269 Hba1/hba2 gene dup/del vrnts
    81270 Jak2 gene
    81271 Htt gene detc abnor alleles
    81272 Kit gene targeted seq analys
    81273 Kit gene analys d816 variant
    81274 Htt gene charac alleles
    81275 Kras gene variants exon 2
    81276 Kras gene addl variants
    81283 Ifnl3 gene
    81284 Fxn gene detc abnor alleles
    81285 Fxn gene charac alleles
    81286 Fxn gene full gene sequence
    81287 Mgmt gene prmtr mthyltn alys
    81288 Mlh1 gene
    81289 Fxn gene known famil variant
    81290 Mcoln1 gene
    81291 Mthfr gene
    81292 Mlh1 gene full seq
    81293 Mlh1 gene known variants
    81294 Mlh1 gene dup/delete variant
    81295 Msh2 gene full seq
    81296 Msh2 gene known variants
    81297 Msh2 gene dup/delete variant
    81298 Msh6 gene full seq
    81299 Msh6 gene known variants
    81300 Msh6 gene dup/delete variant
    81301 Microsatellite instability
    81302 Mecp2 gene full seq
    81303 Mecp2 gene known variant
    81304 Mecp2 gene dup/delet variant
    81305 Myd88 gene p.leu265pro vrnt
    81306 Nudt15 gene common variants
    81310 Npm1 gene
    81311 Nras gene variants exon 2&3
    81312 Pabpn1 gene detc abnor allel
    81313 Pca3/klk3 antigen
    81314 Pdgfra gene
    81315 Pml/raralpha com breakpoints
    81316 Pml/raralpha 1 breakpoint
    81317 Pms2 gene full seq analysis
    81318 Pms2 known familial variants
    81319 Pms2 gene dup/delet variants
    81320 Plcg2 gene common variants
    81321 Pten gene full sequence
    81322 Pten gene known fam variant
    81323 Pten gene dup/delet variant
    81324 Pmp22 gene dup/delet
    81325 Pmp22 gene full sequence
    81326 Pmp22 gene known fam variant
    81327 Sept9 gen prmtr mthyltn alys
    81328 Slco1b1 gene com variants
    81329 Smn1 gene dos/deletion alys
    81330 Smpd1 gene common variants
    81331 Snrpn/ube3a gene
    81332 Serpina1 gene
    81333 Tgfbi gene common variants
    81334 Runx1 gene targeted seq alys
    81335 Tpmt gene com variants
    81336 Smn1 gene full gene sequence
    81337 Smn1 gen nown famil seq vrnt
    81340 Trb@ gene rearrange amplify
    81341 Trb@ gene rearrange dirprobe
    81342 Trg gene rearrangement anal
    81343 Ppp2r2b gen detc abnor allel
    81344 Tbp gene detc abnor alleles
    81345 Tert gene targeted seq alys
    81346 Tyms gene com variants
    81350 Ugt1a1 gene
    81355 Vkorc1 gene
    81361 Hbb gene com variants
    81362 Hbb gene known fam variant
    81363 Hbb gene dup/del variants
    81364 Hbb full gene sequence
    81370 Hla i & ii typing lr
    81371 Hla i & ii type verify lr
    81372 Hla i typing complete lr
    81373 Hla i typing 1 locus lr
    81374 Hla i typing 1 antigen lr
    81375 Hla ii typing ag equiv lr
    81376 Hla ii typing 1 locus lr
    81377 Hla ii type 1 ag equiv lr
    81378 Hla i & ii typing hr
    81379 Hla i typing complete hr
    81380 Hla i typing 1 locus hr
    81381 Hla i typing 1 allele hr
    81382 Hla ii typing 1 loc hr
    81383 Hla ii typing 1 allele hr
    81400 Mopath procedure level 1
    81401 Mopath procedure level 2
    81402 Mopath procedure level 3
    81403 Mopath procedure level 4
    81404 Mopath procedure level 5
    81405 Mopath procedure level 6
    81406 Mopath procedure level 7
    81407 Mopath procedure level 8
    81408 Mopath procedure level 9

    Group 2 Paragraph:

    If any code on this list is billed on a given date of service, then no other code from either this list or list 1 above should also be billed on that date of service, unless it represents a distinct procedural service. If so, providers and suppliers must append the 59 modifier as an attestation that the additional services are separately payable service.



    Group 2 Codes:
    CPT/HCPCS Codes Information Table
    CODEDESCRIPTION
    81410 Aortic dysfunction/dilation
    81411 Aortic dysfunction/dilation
    81412 Ashkenazi jewish assoc dis
    81413 Car ion chnnlpath inc 10 gns
    81414 Car ion chnnlpath inc 2 gns
    81430 Hearing loss sequence analys
    81431 Hearing loss dup/del analys
    81432 Hrdtry brst ca-rlatd dsordrs
    81433 Hrdtry brst ca-rlatd dsordrs
    81434 Hereditary retinal disorders
    81435 Hereditary colon ca dsordrs
    81436 Hereditary colon ca dsordrs
    81437 Heredtry nurondcrn tum dsrdr
    81438 Heredtry nurondcrn tum dsrdr
    81439 Hrdtry cardmypy gene panel
    81440 Mitochondrial gene
    81442 Noonan spectrum disorders
    81443 Genetic tstg severe inh cond
    81445 Targeted genomic seq analys
    81448 Hrdtry perph neurphy panel
    81450 Targeted genomic seq analys

    CPT/HCPCS Modifiers

    Group 1 Paragraph: N/A

    Group 1 Codes:
    CPT/HCPCS Modifiers Information Table
    CODEDESCRIPTION
    59 DISTINCT PROCEDURAL SERVICE: UNDER CERTAIN CIRCUMSTANCES, THE PHYSICIAN MAY NEED TO INDICATE THAT A PROCEDURE OR SERVICE WAS DISTINCT OR INDEPENDENT FROM OTHER SERVICES PERFORMED ON THE SAME DAY. MODIFIER -59 IS USED TO IDENTIFY PROCEDURES/SERVICES THAT ARE NOT NORMALLY REPORTED TOGETHER, BUT ARE APPROPRIATE UNDER THE CIRCUMSTANCES. THIS MAY REPRESENT A DIFFERENT SESSION OR PATIENT ENCOUNTER, DIFFERENT PROCEDURE OR SURGERY, DIFFERNET SITE OR ORGAN SYSTEM, SEPARATE INCISION/EXCISION, SEPARATE LESION, OR SEPARATE INJURY (OR AREA OF INJURY IN EXTENSIVE INJURIES) NOT ORDINARILY ENCOUNTERED OR PERFORMED ON THE SAME DAY BY THE SAME PHYSICIAN. HOWEVER, WHAN ANOTHER ALREADY ESTABLISHED MODIFIER IS APPROPRIATE IT SHOULD BE USED RATHER THAN MODIFIER -59. ONLY IF NO MORE DESCRIPTIVE MODIFIER IS AVAILABLE, AND THE USE OF MODIFIER -59 BEST EXPLAINS THE CIRCUMSTANCES, SHOULD MODIFIER -59 BE USED. MODIFIER CODE 09959 MAY BE USED AS AN ALTERNATE TO MODIFIER -59.

    Group 2 Paragraph: N/A

    Group 2 Codes:
    CPT/HCPCS Modifiers Information Table
    CODEDESCRIPTION
    59 DISTINCT PROCEDURAL SERVICE: UNDER CERTAIN CIRCUMSTANCES, THE PHYSICIAN MAY NEED TO INDICATE THAT A PROCEDURE OR SERVICE WAS DISTINCT OR INDEPENDENT FROM OTHER SERVICES PERFORMED ON THE SAME DAY. MODIFIER -59 IS USED TO IDENTIFY PROCEDURES/SERVICES THAT ARE NOT NORMALLY REPORTED TOGETHER, BUT ARE APPROPRIATE UNDER THE CIRCUMSTANCES. THIS MAY REPRESENT A DIFFERENT SESSION OR PATIENT ENCOUNTER, DIFFERENT PROCEDURE OR SURGERY, DIFFERNET SITE OR ORGAN SYSTEM, SEPARATE INCISION/EXCISION, SEPARATE LESION, OR SEPARATE INJURY (OR AREA OF INJURY IN EXTENSIVE INJURIES) NOT ORDINARILY ENCOUNTERED OR PERFORMED ON THE SAME DAY BY THE SAME PHYSICIAN. HOWEVER, WHAN ANOTHER ALREADY ESTABLISHED MODIFIER IS APPROPRIATE IT SHOULD BE USED RATHER THAN MODIFIER -59. ONLY IF NO MORE DESCRIPTIVE MODIFIER IS AVAILABLE, AND THE USE OF MODIFIER -59 BEST EXPLAINS THE CIRCUMSTANCES, SHOULD MODIFIER -59 BE USED. MODIFIER CODE 09959 MAY BE USED AS AN ALTERNATE TO MODIFIER -59.

    ICD-10 Codes that Support Medical Necessity

    ICD-10 Codes that DO NOT Support Medical Necessity


    Bill Type Codes:

    Contractors may specify Bill Types to help providers identify those Bill Types typically used to report this service. Absence of a Bill Type does not guarantee that the article does not apply to that Bill Type. Complete absence of all Bill Types indicates that coverage is not influenced by Bill Type and the article should be assumed to apply equally to all claims.

    N/A

    Revenue Codes:

    Contractors may specify Revenue Codes to help providers identify those Revenue Codes typically used to report this service. In most instances Revenue Codes are purely advisory. Unless specified in the article, services reported under other Revenue Codes are equally subject to this coverage determination. Complete absence of all Revenue Codes indicates that coverage is not influenced by Revenue Code and the article should be assumed to apply equally to all Revenue Codes.

    N/A

    Other Coding Information

    Group 1 Paragraph: N/A

    Group 1 Codes: N/A

    Expand/Collapse the Revision History section Revision History Information

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    Expand/Collapse the Associated Documents section Associated Documents

    Related Local Coverage Document(s)
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    Public Version(s)
    Updated on 12/09/2019 with effective dates 01/01/2020 - N/A
    Updated on 10/10/2019 with effective dates 10/21/2019 - N/A

    Expand/Collapse the Keywords section Keywords

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